After few months of delay I got the car back, everything seems working well.
I'm impressed by the mechanic pulling it pretty fast (even took months, he worked only days to finish it) and very good quality work. The guy who take care of assembly was new in the shop, brought in the shop after the engine was dissembled.
The stock clutch is so nice and smooth, I hope it will last

The only problem which I noticed is a metallic squeak when I down shift. The suspected part is the crank gear which was reported as showing visible wear:

I'm thinking to replace all gears and parts related to the timing if I have to remove the timing chain again to replace the crankshaft gear.